Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 OR11H4-201ENST00000315409 1082 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 RN7SKP280-201ENST00000364196 304 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 RNA5SP513-201ENST00000364648 118 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 MIR1250-201ENST00000408098 113 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 MED14P1-201ENST00000430517 648 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AL357520.1-201ENST00000441557 453 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 RPL21P89-201ENST00000444021 467 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 RPL5P32-201ENST00000454085 879 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AC133473.1-201ENST00000455173 299 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 RPL23AP2-201ENST00000471227 466 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 SETP11-201ENST00000473027 690 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 VWA8P1-201ENST00000510889 176 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AC108064.1-201ENST00000513791 460 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 PHBP17-201ENST00000528576 541 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AL121766.1-201ENST00000547436 487 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AC011260.1-201ENST00000578420 472 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 MIR1254-2-201ENST00000579553 63 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AC015726.1-201ENST00000602353 681 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AC025588.3-201ENST00000604182 274 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 MIR7844-201ENST00000616161 122 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AL356596.1-201ENST00000624230 379 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AC091965.5-201ENST00000624785 342 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AC006927.3-201ENST00000638789 384 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
BEST3Q8N1M1 AL356473.1-201ENST00000406203 1408 ntBASIC3.84□□□□□ -1.79
BEST3Q8N1M1 ZNF734P-201ENST00000419494 1534 ntBASIC3.84□□□□□ -1.8
BEST3Q8N1M1 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
BEST3Q8N1M1 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
BEST3Q8N1M1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
BEST3Q8N1M1 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 RPL23AP57-201ENST00000332361 466 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 RNU6-433P-201ENST00000363216 104 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 RNVU1-3-201ENST00000364313 161 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 RNU6-730P-201ENST00000383954 104 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 DHFRP6-201ENST00000401776 268 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 TPMTP2-201ENST00000414372 726 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 OFD1P18Y-201ENST00000420889 959 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC012065.2-201ENST00000421295 375 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 RBMY1KP-201ENST00000423480 476 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 MTND1P30-201ENST00000441241 901 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 CDC27P1-201ENST00000445384 715 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC073387.1-201ENST00000453261 709 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC139783.2-201ENST00000504847 1145 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC109458.1-201ENST00000508858 316 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 MTCO3P28-201ENST00000513351 515 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC005798.1-201ENST00000513715 387 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms