Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 DBIP2-201ENST00000419076 262 ntBASIC3.77□□□□□ -1.81
VCPP55072 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.77□□□□□ -1.81
VCPP55072 AC005517.2-201ENST00000424673 553 ntBASIC3.77□□□□□ -1.81
VCPP55072 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.77□□□□□ -1.81
VCPP55072 RPL21P112-201ENST00000434403 463 ntBASIC3.77□□□□□ -1.81
VCPP55072 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.77□□□□□ -1.81
VCPP55072 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.77□□□□□ -1.81
VCPP55072 RPS26P30-201ENST00000443431 335 ntBASIC3.77□□□□□ -1.81
VCPP55072 RPL23AP15-201ENST00000450202 459 ntBASIC3.77□□□□□ -1.81
VCPP55072 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.77□□□□□ -1.81
VCPP55072 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.77□□□□□ -1.81
VCPP55072 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.77□□□□□ -1.81
VCPP55072 PHBP14-201ENST00000512887 367 ntBASIC3.77□□□□□ -1.81
VCPP55072 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.77□□□□□ -1.81
VCPP55072 AP003066.2-201ENST00000529375 555 ntBASIC3.77□□□□□ -1.81
VCPP55072 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.77□□□□□ -1.81
VCPP55072 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.77□□□□□ -1.81
VCPP55072 AC023161.2-201ENST00000551218 780 ntBASIC3.77□□□□□ -1.81
VCPP55072 SNRPGP15-201ENST00000600149 222 ntBASIC3.77□□□□□ -1.81
VCPP55072 AC068620.3-201ENST00000602749 560 ntBASIC3.77□□□□□ -1.81
VCPP55072 AP002906.1-201ENST00000603405 233 ntBASIC3.77□□□□□ -1.81
VCPP55072 AC005156.1-201ENST00000613371 573 ntBASIC3.77□□□□□ -1.81
VCPP55072 AL732618.1-201ENST00000623251 301 ntBASIC3.77□□□□□ -1.81
VCPP55072 ZNF807-201ENST00000328088 1707 ntBASIC3.77□□□□□ -1.81
VCPP55072 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
VCPP55072 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VCPP55072 AC073055.1-201ENST00000456901 1621 ntBASIC3.77□□□□□ -1.81
VCPP55072 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VCPP55072 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VCPP55072 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VCPP55072 AC046144.1-201ENST00000478559 1853 ntBASIC3.76□□□□□ -1.81
VCPP55072 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VCPP55072 U6.112-201ENST00000384129 70 ntBASIC3.76□□□□□ -1.81
VCPP55072 MIR525-201ENST00000384978 85 ntBASIC3.76□□□□□ -1.81
VCPP55072 RNU6-932P-201ENST00000391108 106 ntBASIC3.76□□□□□ -1.81
VCPP55072 AC246680.2-201ENST00000422106 389 ntBASIC3.76□□□□□ -1.81
VCPP55072 OSTCP5-201ENST00000425293 453 ntBASIC3.76□□□□□ -1.81
VCPP55072 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.76□□□□□ -1.81
VCPP55072 ATP5JP1-201ENST00000431631 322 ntBASIC3.76□□□□□ -1.81
VCPP55072 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.76□□□□□ -1.81
VCPP55072 RPL21P110-201ENST00000433345 446 ntBASIC3.76□□□□□ -1.81
VCPP55072 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.76□□□□□ -1.81
VCPP55072 AC091862.1-201ENST00000438016 1100 ntBASIC3.76□□□□□ -1.81
VCPP55072 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.76□□□□□ -1.81
VCPP55072 RBMY2UP-201ENST00000453474 324 ntBASIC3.76□□□□□ -1.81
VCPP55072 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.76□□□□□ -1.81
VCPP55072 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.76□□□□□ -1.81
VCPP55072 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.76□□□□□ -1.81
VCPP55072 AC004801.2-202ENST00000463559 283 ntBASIC3.76□□□□□ -1.81
VCPP55072 RPL31P13-201ENST00000484151 370 ntBASIC3.76□□□□□ -1.81
VCPP55072 RN7SL504P-201ENST00000494496 287 ntBASIC3.76□□□□□ -1.81
VCPP55072 HMGB3P15-201ENST00000507326 574 ntBASIC3.76□□□□□ -1.81
VCPP55072 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.76□□□□□ -1.81
VCPP55072 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.76□□□□□ -1.81
VCPP55072 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.76□□□□□ -1.81
VCPP55072 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.76□□□□□ -1.81
VCPP55072 AC087894.1-201ENST00000538359 518 ntBASIC3.76□□□□□ -1.81
VCPP55072 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.76□□□□□ -1.81
VCPP55072 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.76□□□□□ -1.81
VCPP55072 AC023824.3-201ENST00000569003 562 ntBASIC3.76□□□□□ -1.81
VCPP55072 AC126365.2-201ENST00000580630 379 ntBASIC3.76□□□□□ -1.81
VCPP55072 MIR4672-201ENST00000583126 81 ntBASIC3.76□□□□□ -1.81
VCPP55072 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.76□□□□□ -1.81
VCPP55072 AC006254.3-201ENST00000603353 884 ntBASIC3.76□□□□□ -1.81
VCPP55072 AC011468.4-201ENST00000603942 409 ntBASIC3.76□□□□□ -1.81
VCPP55072 AC090425.2-201ENST00000608818 501 ntBASIC3.76□□□□□ -1.81
VCPP55072 AC008121.2-201ENST00000614647 523 ntBASIC3.76□□□□□ -1.81
VCPP55072 AL359757.2-201ENST00000624309 274 ntBASIC3.76□□□□□ -1.81
VCPP55072 AC092608.3-201ENST00000625017 386 ntBASIC3.76□□□□□ -1.81
VCPP55072 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.76□□□□□ -1.81
VCPP55072 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.76□□□□□ -1.81
VCPP55072 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VCPP55072 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
VCPP55072 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.76□□□□□ -1.81
VCPP55072 SRP72P2-201ENST00000344851 1979 ntBASIC3.76□□□□□ -1.81
VCPP55072 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
VCPP55072 MTND4P8-201ENST00000514997 1362 ntBASIC3.76□□□□□ -1.81
VCPP55072 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VCPP55072 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VCPP55072 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.75□□□□□ -1.81
VCPP55072 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
VCPP55072 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.75□□□□□ -1.81
VCPP55072 AL512646.1-201ENST00000269395 1077 ntBASIC3.75□□□□□ -1.81
VCPP55072 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
VCPP55072 RNU6-1176P-201ENST00000390955 107 ntBASIC3.75□□□□□ -1.81
VCPP55072 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.75□□□□□ -1.81
VCPP55072 EIF5P1-201ENST00000400019 1231 ntBASIC3.75□□□□□ -1.81
VCPP55072 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.75□□□□□ -1.81
VCPP55072 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.75□□□□□ -1.81
VCPP55072 OR1AA1P-201ENST00000419597 916 ntBASIC3.75□□□□□ -1.81
VCPP55072 AC245054.1-201ENST00000420944 258 ntBASIC3.75□□□□□ -1.81
VCPP55072 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.75□□□□□ -1.81
VCPP55072 RPS7P2-201ENST00000435134 607 ntBASIC3.75□□□□□ -1.81
VCPP55072 YWHAZP8-201ENST00000436935 731 ntBASIC3.75□□□□□ -1.81
VCPP55072 SETP5-201ENST00000437270 562 ntBASIC3.75□□□□□ -1.81
VCPP55072 UBE2V1P5-201ENST00000440070 405 ntBASIC3.75□□□□□ -1.81
VCPP55072 AC005002.1-201ENST00000447458 540 ntBASIC3.75□□□□□ -1.81
VCPP55072 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.75□□□□□ -1.81
VCPP55072 RPL23AP55-201ENST00000498163 452 ntBASIC3.75□□□□□ -1.81
VCPP55072 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms