Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC146507.2-201ENST00000460608 476 ntBASIC2.88□□□□□ -1.95
SGCEO43556 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.88□□□□□ -1.95
SGCEO43556 AC010301.1-201ENST00000473936 355 ntBASIC2.88□□□□□ -1.95
SGCEO43556 RN7SL293P-201ENST00000481765 281 ntBASIC2.88□□□□□ -1.95
SGCEO43556 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.88□□□□□ -1.95
SGCEO43556 RPL7P38-201ENST00000488396 739 ntBASIC2.88□□□□□ -1.95
SGCEO43556 AP002812.1-201ENST00000495378 474 ntBASIC2.88□□□□□ -1.95
SGCEO43556 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.88□□□□□ -1.95
SGCEO43556 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.88□□□□□ -1.95
SGCEO43556 MTCYBP37-201ENST00000510642 1133 ntBASIC2.88□□□□□ -1.95
SGCEO43556 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.88□□□□□ -1.95
SGCEO43556 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.88□□□□□ -1.95
SGCEO43556 AC083923.1-201ENST00000523708 376 ntBASIC2.88□□□□□ -1.95
SGCEO43556 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.88□□□□□ -1.95
SGCEO43556 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.88□□□□□ -1.95
SGCEO43556 AC092470.1-201ENST00000546187 132 ntBASIC2.88□□□□□ -1.95
SGCEO43556 AC011611.1-201ENST00000552179 197 ntBASIC2.88□□□□□ -1.95
SGCEO43556 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.88□□□□□ -1.95
SGCEO43556 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.88□□□□□ -1.95
SGCEO43556 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.88□□□□□ -1.95
SGCEO43556 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.88□□□□□ -1.95
SGCEO43556 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.88□□□□□ -1.95
SGCEO43556 AL669831.4-202ENST00000590817 238 ntBASIC2.88□□□□□ -1.95
SGCEO43556 AC245389.1-201ENST00000605141 529 ntBASIC2.88□□□□□ -1.95
SGCEO43556 AL627309.6-201ENST00000606857 840 ntBASIC2.88□□□□□ -1.95
SGCEO43556 AC004775.1-201ENST00000607389 753 ntBASIC2.88□□□□□ -1.95
SGCEO43556 AL157817.1-201ENST00000614264 790 ntBASIC2.88□□□□□ -1.95
SGCEO43556 AL110115.1-201ENST00000614396 364 ntBASIC2.88□□□□□ -1.95
SGCEO43556 AC092608.3-201ENST00000625017 386 ntBASIC2.88□□□□□ -1.95
SGCEO43556 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
SGCEO43556 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.88□□□□□ -1.95
SGCEO43556 AC103988.1-201ENST00000566382 2177 ntBASIC2.88□□□□□ -1.95
SGCEO43556 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SGCEO43556 AC007342.9-201ENST00000623877 1385 ntBASIC2.87□□□□□ -1.95
SGCEO43556 RNU6-543P-201ENST00000362576 108 ntBASIC2.87□□□□□ -1.95
SGCEO43556 RNU6-263P-201ENST00000363811 107 ntBASIC2.87□□□□□ -1.95
SGCEO43556 Y_RNA.493-201ENST00000384422 102 ntBASIC2.87□□□□□ -1.95
SGCEO43556 MIR490-201ENST00000384865 128 ntBASIC2.87□□□□□ -1.95
SGCEO43556 MIR449B-201ENST00000384995 97 ntBASIC2.87□□□□□ -1.95
SGCEO43556 ATP5F1P3-201ENST00000397213 657 ntBASIC2.87□□□□□ -1.95
SGCEO43556 RNU4-78P-201ENST00000410940 126 ntBASIC2.87□□□□□ -1.95
SGCEO43556 HSPE1P1-201ENST00000421494 318 ntBASIC2.87□□□□□ -1.95
SGCEO43556 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.87□□□□□ -1.95
SGCEO43556 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.87□□□□□ -1.95
SGCEO43556 AL050321.1-201ENST00000432363 400 ntBASIC2.87□□□□□ -1.95
SGCEO43556 ARL4AP4-201ENST00000434170 518 ntBASIC2.87□□□□□ -1.95
SGCEO43556 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.87□□□□□ -1.95
SGCEO43556 SNRPEP4-201ENST00000435815 279 ntBASIC2.87□□□□□ -1.95
SGCEO43556 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SGCEO43556 RPL21P2-201ENST00000440049 481 ntBASIC2.87□□□□□ -1.95
SGCEO43556 ATP5C1P1-201ENST00000441945 895 ntBASIC2.87□□□□□ -1.95
SGCEO43556 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.87□□□□□ -1.95
SGCEO43556 RPL36AP33-201ENST00000450395 310 ntBASIC2.87□□□□□ -1.95
SGCEO43556 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SGCEO43556 AC017015.1-201ENST00000477387 286 ntBASIC2.87□□□□□ -1.95
SGCEO43556 RPL21P13-201ENST00000488305 481 ntBASIC2.87□□□□□ -1.95
SGCEO43556 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SGCEO43556 AC118282.1-201ENST00000506408 765 ntBASIC2.87□□□□□ -1.95
SGCEO43556 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.87□□□□□ -1.95
SGCEO43556 AC119751.1-201ENST00000513357 765 ntBASIC2.87□□□□□ -1.95
SGCEO43556 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SGCEO43556 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.87□□□□□ -1.95
SGCEO43556 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.87□□□□□ -1.95
SGCEO43556 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.87□□□□□ -1.95
SGCEO43556 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.87□□□□□ -1.95
SGCEO43556 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.87□□□□□ -1.95
SGCEO43556 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.87□□□□□ -1.95
SGCEO43556 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.87□□□□□ -1.95
SGCEO43556 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.87□□□□□ -1.95
SGCEO43556 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SGCEO43556 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.87□□□□□ -1.95
SGCEO43556 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.87□□□□□ -1.95
SGCEO43556 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.87□□□□□ -1.95
SGCEO43556 AC073476.4-201ENST00000628409 72 ntBASIC2.87□□□□□ -1.95
SGCEO43556 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.87□□□□□ -1.95
SGCEO43556 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.87□□□□□ -1.95
SGCEO43556 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.87□□□□□ -1.95
SGCEO43556 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.87□□□□□ -1.95
SGCEO43556 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SGCEO43556 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.86□□□□□ -1.95
SGCEO43556 AC092435.3-201ENST00000565538 3654 ntBASIC2.86□□□□□ -1.95
SGCEO43556 SEC63P2-201ENST00000503863 1939 ntBASIC2.86□□□□□ -1.95
SGCEO43556 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
SGCEO43556 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SGCEO43556 AL049781.1-201ENST00000623195 3585 ntBASIC2.86□□□□□ -1.95
SGCEO43556 ENSAP3-201ENST00000312710 333 ntBASIC2.86□□□□□ -1.95
SGCEO43556 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SGCEO43556 RNU1-70P-201ENST00000362618 164 ntBASIC2.86□□□□□ -1.95
SGCEO43556 RNU1-33P-201ENST00000364249 162 ntBASIC2.86□□□□□ -1.95
SGCEO43556 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.86□□□□□ -1.95
SGCEO43556 RNU6-1226P-201ENST00000384317 107 ntBASIC2.86□□□□□ -1.95
SGCEO43556 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SGCEO43556 RPL21P3-201ENST00000395517 478 ntBASIC2.86□□□□□ -1.95
SGCEO43556 RNA5SP44-201ENST00000410446 133 ntBASIC2.86□□□□□ -1.95
SGCEO43556 AC007899.1-201ENST00000412776 775 ntBASIC2.86□□□□□ -1.95
SGCEO43556 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.86□□□□□ -1.95
SGCEO43556 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.86□□□□□ -1.95
SGCEO43556 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.86□□□□□ -1.95
SGCEO43556 RPF2P1-201ENST00000424137 906 ntBASIC2.86□□□□□ -1.95
SGCEO43556 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms