Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNA5SP235-201ENST00000365411 114 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 RNU6-441P-201ENST00000384545 106 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 MTCO3P31-201ENST00000405526 789 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AL355379.1-201ENST00000405542 640 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AC005300.1-201ENST00000428401 373 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 RPS3AP12-201ENST00000443616 753 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 RPL7P59-201ENST00000447700 943 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 HMGB3P30-201ENST00000457863 606 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 RPS3AP50-201ENST00000487064 803 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 RPL21P13-201ENST00000488305 481 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AC112206.4-201ENST00000515142 405 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AC104057.1-201ENST00000515547 497 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AC090666.1-201ENST00000578241 445 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 MIR5195-201ENST00000583555 115 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 HSPE1P14-201ENST00000605812 302 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AC012531.5-201ENST00000611375 151 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 MIR8058-201ENST00000615737 89 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AC022149.2-201ENST00000621061 203 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AC092628.2-201ENST00000622492 339 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 AC073073.2-201ENST00000609827 2578 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AC032011.1-201ENST00000611703 1549 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 SEPT7P7-201ENST00000420492 1301 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AL391417.1-201ENST00000404100 426 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 RNA5SP120-201ENST00000410900 112 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 BX323014.1-201ENST00000412876 237 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 RPF2P1-201ENST00000424137 906 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 B3GNT2P1-201ENST00000434960 952 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AL591503.2-201ENST00000442314 1005 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 CEACAMP4-201ENST00000457676 421 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 NF1P3-201ENST00000457709 450 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AL049830.2-201ENST00000480072 201 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AC011352.3-201ENST00000505162 593 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 PDCL2P2-201ENST00000533651 189 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 ZNF971P-201ENST00000562068 1249 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 MIR4276-201ENST00000584832 70 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AC067852.3-201ENST00000589177 561 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AL442067.2-201ENST00000614033 363 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 VN1R7P-201ENST00000619242 903 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AC127502.3-201ENST00000636170 1206 ntBASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.04□□□□□ -1.92
CLCF1Q9UBD9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 USP8P1-201ENST00000494673 3183 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 RNU6-1226P-201ENST00000384317 107 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 RNU6-1257P-201ENST00000384625 110 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AL121978.1-201ENST00000402778 359 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC009237.2-201ENST00000421358 284 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms