Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 PIGPP4-201ENST00000584447 307 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.73□□□□□ -1.81
CLPTM1O96005 AC040904.1-201ENST00000590850 223 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 AC103881.1-201ENST00000603476 538 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 AC069304.3-201ENST00000603938 1084 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 AL365503.1-201ENST00000605247 905 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 ARF4P1-201ENST00000605447 541 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 AL392048.1-201ENST00000613946 534 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 AC083809.1-201ENST00000615051 472 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 AC243756.2-201ENST00000618406 463 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.73□□□□□ -1.81
CLPTM1O96005 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.73□□□□□ -1.81
CLPTM1O96005 AC006065.5-201ENST00000623427 349 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CLPTM1O96005 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.73□□□□□ -1.81
CLPTM1O96005 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLPTM1O96005 MKKS-204ENST00000639674 192 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CLPTM1O96005 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CLPTM1O96005 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLPTM1O96005 MTND5P31-201ENST00000419366 1374 ntBASIC3.73□□□□□ -1.81
CLPTM1O96005 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLPTM1O96005 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLPTM1O96005 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.72□□□□□ -1.81
CLPTM1O96005 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLPTM1O96005 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.72□□□□□ -1.81
CLPTM1O96005 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLPTM1O96005 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLPTM1O96005 RNU6-492P-201ENST00000363035 104 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 Y_RNA.311-201ENST00000365068 96 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLPTM1O96005 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLPTM1O96005 RNU6-1200P-201ENST00000384162 107 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 SNORD116-1-201ENST00000384335 95 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 HLFP1-201ENST00000402375 499 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 AL590704.1-201ENST00000402856 794 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 AL391417.1-201ENST00000404100 426 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.72□□□□□ -1.81
CLPTM1O96005 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.72□□□□□ -1.81
CLPTM1O96005 AC007390.1-201ENST00000415722 356 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 RPP40P1-201ENST00000426762 456 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 ARF4P2-201ENST00000430209 526 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 AL513175.1-201ENST00000431492 780 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.72□□□□□ -1.81
CLPTM1O96005 RPS25P9-201ENST00000435591 252 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.72□□□□□ -1.81
CLPTM1O96005 MTCYBP3-201ENST00000445588 1137 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.72□□□□□ -1.81
CLPTM1O96005 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.72□□□□□ -1.81
CLPTM1O96005 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.72□□□□□ -1.81
CLPTM1O96005 RPS23P7-201ENST00000466210 444 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 AC109327.1-201ENST00000471666 403 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 ACTG1P13-201ENST00000486987 1043 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 AC026784.1-201ENST00000507986 352 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.72□□□□□ -1.81
CLPTM1O96005 AC002456.2-201ENST00000509356 380 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 KRT19P6-201ENST00000510983 209 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 SNORA48.10-201ENST00000516965 160 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.72□□□□□ -1.81
CLPTM1O96005 MTCO1P49-201ENST00000523429 802 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.72□□□□□ -1.81
CLPTM1O96005 UBE2NP1-201ENST00000545592 458 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 PSMB7P1-201ENST00000556349 514 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 RPL23AP87-202ENST00000573039 466 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.72□□□□□ -1.81
CLPTM1O96005 MIR5047-201ENST00000579212 100 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 MIR4425-201ENST00000580572 84 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.72□□□□□ -1.81
CLPTM1O96005 MIR3138-201ENST00000585238 82 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 VN1R90P-201ENST00000595717 726 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 AC015726.1-201ENST00000602353 681 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLPTM1O96005 AC079248.2-201ENST00000623779 326 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 AC091905.1-201ENST00000624400 311 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 AC048347.1-201ENST00000624621 427 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 AL158163.1-201ENST00000603915 1649 ntBASIC3.72□□□□□ -1.81
CLPTM1O96005 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLPTM1O96005 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.72□□□□□ -1.81
CLPTM1O96005 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.72□□□□□ -1.81
CLPTM1O96005 DBF4P1-201ENST00000412976 1892 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLPTM1O96005 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CLPTM1O96005 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLPTM1O96005 SNORA31-201ENST00000362607 130 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 RNU1-132P-201ENST00000364300 164 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 RNU6-115P-201ENST00000364310 107 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 RNU6-621P-201ENST00000364752 109 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 RNA5SP189-201ENST00000364920 115 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 SUGT1P1-201ENST00000379514 476 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.71□□□□□ -1.82
CLPTM1O96005 MIR1251-201ENST00000408552 70 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.71□□□□□ -1.82
CLPTM1O96005 MTCO3P1-205ENST00000422088 832 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLPTM1O96005 MTND4P20-201ENST00000424125 869 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 AL031736.2-201ENST00000426573 787 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 AC083863.1-201ENST00000438811 231 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.71□□□□□ -1.82
CLPTM1O96005 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms