Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 COX6CP15-201ENST00000426313 211 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 ELOCP26-201ENST00000436067 329 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 MTND5P14-201ENST00000441481 1267 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 SLC25A18P1-201ENST00000449385 454 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 BTF3P5-201ENST00000457252 467 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 AC116353.2-201ENST00000505332 712 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 AC108064.1-201ENST00000513791 460 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 AC022483.1-201ENST00000514020 567 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 SNORA18.6-201ENST00000516792 115 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 AC022878.1-201ENST00000530684 149 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 AC006960.3-201ENST00000561845 705 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 AP001506.1-201ENST00000615444 211 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 AC108479.2-201ENST00000617314 601 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 AL157786.1-207ENST00000627771 695 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 IQCB2P-201ENST00000401788 1633 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNX18Q96RF0 ELF2P3-201ENST00000445099 1506 ntBASIC4.31□□□□□ -1.72
SNX18Q96RF0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SNX18Q96RF0 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX18Q96RF0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 OR11H4-201ENST00000315409 1082 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 RPL23AP57-201ENST00000332361 466 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 RNU6-1243P-201ENST00000364028 107 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 SNORD74.4-201ENST00000364129 80 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 RNU6-1226P-201ENST00000384317 107 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 RNU6-146P-201ENST00000384602 108 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX18Q96RF0 SSXP10-201ENST00000402595 565 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 RN7SKP266-201ENST00000410232 287 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 EIF4A1P3-201ENST00000411521 244 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 RPS3AP3-201ENST00000411933 242 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC114755.2-201ENST00000413520 361 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 RPL30P16-201ENST00000419341 429 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 NANOGP6-201ENST00000429190 847 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 MTND1P2-201ENST00000430604 821 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC109583.1-201ENST00000432156 268 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 RPS17P8-201ENST00000434525 335 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 CEACAMP1-201ENST00000434624 1035 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 RHOT1P3-201ENST00000436571 331 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 RPL23AP74-201ENST00000437246 471 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 RPL7P11-201ENST00000437586 658 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 RPL36AP15-201ENST00000444514 266 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC003071.1-201ENST00000451219 789 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 RPS3AP17-201ENST00000472594 777 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC010683.1-201ENST00000473673 378 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 ACTR3P3-201ENST00000480448 893 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC007686.1-201ENST00000488511 463 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC090453.1-201ENST00000495560 436 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC110792.2-201ENST00000510278 224 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 PPBPP1-201ENST00000510807 373 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 KCTD9P2-201ENST00000512203 1013 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC104057.1-201ENST00000515547 497 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 HSPA8P13-201ENST00000523715 472 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 HIGD1AP5-201ENST00000529959 259 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC124947.2-202ENST00000552735 133 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 RPS3AP4-201ENST00000555161 764 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC009977.1-201ENST00000586015 570 ntBASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX18Q96RF0 AC067959.1-201ENST00000604334 379 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms