Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Gm22697-201ENSMUST00000175194 63 ntBASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
H2afb2S4R1M3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Gm18101-201ENSMUST00000215769 548 ntBASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Gm21559-201ENSMUST00000220638 855 ntBASIC16.41■□□□□ 0.22
H2afb2S4R1M3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Gm9987-201ENSMUST00000069768 567 ntBASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Gm8587-201ENSMUST00000076538 843 ntBASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb2S4R1M3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms