Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Atp6ap1Q9R1Q9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atp6ap1Q9R1Q9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atp6ap1Q9R1Q9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atp6ap1Q9R1Q9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atp6ap1Q9R1Q9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp6ap1Q9R1Q9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp6ap1Q9R1Q9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Atp6ap1Q9R1Q9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp6ap1Q9R1Q9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp6ap1Q9R1Q9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Atp6ap1Q9R1Q9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Atp6ap1Q9R1Q9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Atp6ap1Q9R1Q9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp6ap1Q9R1Q9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.06■□□□□ 0.16
Atp6ap1Q9R1Q9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Atp6ap1Q9R1Q9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.06■□□□□ 0.16
Atp6ap1Q9R1Q9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp6ap1Q9R1Q9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp6ap1Q9R1Q9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Atp6ap1Q9R1Q9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp6ap1Q9R1Q9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Gm6659-201ENSMUST00000174752 547 ntBASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Gm23634-201ENSMUST00000175071 91 ntBASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp6ap1Q9R1Q9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Gm5587-201ENSMUST00000206270 674 ntBASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Atp6ap1Q9R1Q9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Mir770-201ENSMUST00000103252 94 ntBASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Gm25016-201ENSMUST00000158399 131 ntBASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp6ap1Q9R1Q9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms