Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom3Q9QXN0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.42■□□□□ 0.22
Shroom3Q9QXN0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom3Q9QXN0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom3Q9QXN0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.42■□□□□ 0.22
Shroom3Q9QXN0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.42■□□□□ 0.22
Shroom3Q9QXN0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom3Q9QXN0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom3Q9QXN0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom3Q9QXN0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom3Q9QXN0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom3Q9QXN0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom3Q9QXN0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom3Q9QXN0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom3Q9QXN0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Shroom3Q9QXN0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom3Q9QXN0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom3Q9QXN0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom3Q9QXN0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shroom3Q9QXN0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.41■□□□□ 0.22
Shroom3Q9QXN0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom3Q9QXN0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom3Q9QXN0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom3Q9QXN0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Shroom3Q9QXN0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom3Q9QXN0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Shroom3Q9QXN0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom3Q9QXN0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.41■□□□□ 0.22
Shroom3Q9QXN0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom3Q9QXN0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Shroom3Q9QXN0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom3Q9QXN0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom3Q9QXN0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom3Q9QXN0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shroom3Q9QXN0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Shroom3Q9QXN0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Gm27742-201ENSMUST00000184667 60 ntBASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom3Q9QXN0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Shroom3Q9QXN0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom3Q9QXN0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom3Q9QXN0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom3Q9QXN0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Shroom3Q9QXN0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.39■□□□□ 0.21
Shroom3Q9QXN0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom3Q9QXN0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.39■□□□□ 0.21
Shroom3Q9QXN0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom3Q9QXN0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.39■□□□□ 0.21
Shroom3Q9QXN0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.39■□□□□ 0.21
Shroom3Q9QXN0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.39■□□□□ 0.21
Shroom3Q9QXN0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom3Q9QXN0 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.39■□□□□ 0.21
Shroom3Q9QXN0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom3Q9QXN0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 Gm27459-201ENSMUST00000184860 107 ntBASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 Gm29707-201ENSMUST00000196325 491 ntBASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom3Q9QXN0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms