Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Haglr-201ENSMUST00000100000 2085 ntBASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sec61a2Q9JLR1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a2Q9JLR1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a2Q9JLR1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a2Q9JLR1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a2Q9JLR1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a2Q9JLR1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a2Q9JLR1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.79□□□□□ -0.04
Sec61a2Q9JLR1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a2Q9JLR1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a2Q9JLR1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a2Q9JLR1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sec61a2Q9JLR1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a2Q9JLR1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a2Q9JLR1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a2Q9JLR1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a2Q9JLR1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a2Q9JLR1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a2Q9JLR1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sec61a2Q9JLR1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.79□□□□□ -0.04
Sec61a2Q9JLR1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a2Q9JLR1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a2Q9JLR1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a2Q9JLR1 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.77□□□□□ -0.04
Sec61a2Q9JLR1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a2Q9JLR1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a2Q9JLR1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a2Q9JLR1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a2Q9JLR1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.77□□□□□ -0.04
Sec61a2Q9JLR1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a2Q9JLR1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a2Q9JLR1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.77□□□□□ -0.05
Sec61a2Q9JLR1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Sec61a2Q9JLR1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sec61a2Q9JLR1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Sec61a2Q9JLR1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sec61a2Q9JLR1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sec61a2Q9JLR1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sec61a2Q9JLR1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sec61a2Q9JLR1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Sec61a2Q9JLR1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sec61a2Q9JLR1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sec61a2Q9JLR1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms