Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.3□□□□□ -0.28
Trem3Q9JKE1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.3□□□□□ -0.28
Trem3Q9JKE1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem3Q9JKE1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem3Q9JKE1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem3Q9JKE1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem3Q9JKE1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trem3Q9JKE1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trem3Q9JKE1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem3Q9JKE1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem3Q9JKE1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Gm12527-201ENSMUST00000117967 564 ntBASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Gm10698-201ENSMUST00000182663 604 ntBASIC13.29□□□□□ -0.28
Trem3Q9JKE1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem3Q9JKE1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem3Q9JKE1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trem3Q9JKE1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trem3Q9JKE1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trem3Q9JKE1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trem3Q9JKE1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trem3Q9JKE1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trem3Q9JKE1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Trem3Q9JKE1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trem3Q9JKE1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trem3Q9JKE1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trem3Q9JKE1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trem3Q9JKE1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trem3Q9JKE1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms