Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Herpud1Q9JJK5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Herpud1Q9JJK5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
Herpud1Q9JJK5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Gm22240-201ENSMUST00000175225 82 ntBASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Gm27011-201ENSMUST00000182352 972 ntBASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Gm10812-201ENSMUST00000099864 546 ntBASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms