Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Gm18958-201ENSMUST00000174258 762 ntBASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Gm10602-201ENSMUST00000098239 609 ntBASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf13bQ9ET35 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Gm12085-201ENSMUST00000119263 940 ntBASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf13bQ9ET35 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tnfrsf13bQ9ET35 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf13bQ9ET35 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf13bQ9ET35 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf13bQ9ET35 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms