Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube4bQ9ES00 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube4bQ9ES00 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube4bQ9ES00 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube4bQ9ES00 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ube4bQ9ES00 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.84■□□□□ 0.13
Ube4bQ9ES00 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube4bQ9ES00 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube4bQ9ES00 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube4bQ9ES00 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube4bQ9ES00 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube4bQ9ES00 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ube4bQ9ES00 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Ube4bQ9ES00 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ube4bQ9ES00 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ube4bQ9ES00 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
Ube4bQ9ES00 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ube4bQ9ES00 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4bQ9ES00 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4bQ9ES00 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.83■□□□□ 0.12
Ube4bQ9ES00 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4bQ9ES00 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4bQ9ES00 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4bQ9ES00 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4bQ9ES00 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4bQ9ES00 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4bQ9ES00 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4bQ9ES00 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ube4bQ9ES00 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Gm7291-201ENSMUST00000199147 382 ntBASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ube4bQ9ES00 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube4bQ9ES00 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Ube4bQ9ES00 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4bQ9ES00 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4bQ9ES00 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4bQ9ES00 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ube4bQ9ES00 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4bQ9ES00 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4bQ9ES00 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4bQ9ES00 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4bQ9ES00 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ube4bQ9ES00 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ube4bQ9ES00 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ube4bQ9ES00 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ube4bQ9ES00 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ube4bQ9ES00 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4bQ9ES00 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4bQ9ES00 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms