Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Gm4535-201ENSMUST00000182274 558 ntBASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Gm7506-201ENSMUST00000207758 815 ntBASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Gm10355-201ENSMUST00000097146 517 ntBASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.04■□□□□ 0.16
Rrp8Q9DB85 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp8Q9DB85 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Rrp8Q9DB85 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp8Q9DB85 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp8Q9DB85 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Rrp8Q9DB85 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp8Q9DB85 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rrp8Q9DB85 Gm15173-201ENSMUST00000122049 433 ntBASIC16.03■□□□□ 0.16
Rrp8Q9DB85 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp8Q9DB85 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.03■□□□□ 0.16
Rrp8Q9DB85 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.03■□□□□ 0.16
Rrp8Q9DB85 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp8Q9DB85 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp8Q9DB85 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp8Q9DB85 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp8Q9DB85 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp8Q9DB85 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.03■□□□□ 0.16
Rrp8Q9DB85 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp8Q9DB85 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.03■□□□□ 0.16
Rrp8Q9DB85 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp8Q9DB85 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp8Q9DB85 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Rrp8Q9DB85 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.02■□□□□ 0.16
Rrp8Q9DB85 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp8Q9DB85 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Rrp8Q9DB85 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp8Q9DB85 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp8Q9DB85 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Rrp8Q9DB85 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp8Q9DB85 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Rrp8Q9DB85 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp8Q9DB85 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp8Q9DB85 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
Rrp8Q9DB85 Gm25990-201ENSMUST00000102440 86 ntBASIC16.02■□□□□ 0.16
Rrp8Q9DB85 Gm13418-201ENSMUST00000119097 944 ntBASIC16.02■□□□□ 0.16
Rrp8Q9DB85 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.02■□□□□ 0.16
Rrp8Q9DB85 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.02■□□□□ 0.16
Rrp8Q9DB85 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp8Q9DB85 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Rrp8Q9DB85 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Rrp8Q9DB85 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rrp8Q9DB85 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rrp8Q9DB85 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Rrp8Q9DB85 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rrp8Q9DB85 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.02■□□□□ 0.15
Rrp8Q9DB85 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.02■□□□□ 0.15
Rrp8Q9DB85 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rrp8Q9DB85 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rrp8Q9DB85 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rrp8Q9DB85 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rrp8Q9DB85 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rrp8Q9DB85 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rrp8Q9DB85 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rrp8Q9DB85 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.01■□□□□ 0.15
Rrp8Q9DB85 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rrp8Q9DB85 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rrp8Q9DB85 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.01■□□□□ 0.15
Rrp8Q9DB85 Gm7230-201ENSMUST00000173026 815 ntBASIC16.01■□□□□ 0.15
Rrp8Q9DB85 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms