Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd3l1Q9D9H3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd3l1Q9D9H3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Mbd3l1Q9D9H3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd3l1Q9D9H3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd3l1Q9D9H3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Spcs1-204ENSMUST00000226782 949 ntBASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd3l1Q9D9H3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Gm11421-201ENSMUST00000122124 294 ntBASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mbd3l1Q9D9H3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Gm43060-201ENSMUST00000200621 289 ntBASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Mbd3l1Q9D9H3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mbd3l1Q9D9H3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.21□□□□□ -0.13
Mbd3l1Q9D9H3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mbd3l1Q9D9H3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mbd3l1Q9D9H3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mbd3l1Q9D9H3 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.21□□□□□ -0.13
Mbd3l1Q9D9H3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Mbd3l1Q9D9H3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mbd3l1Q9D9H3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Mbd3l1Q9D9H3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mbd3l1Q9D9H3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mbd3l1Q9D9H3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.21□□□□□ -0.13
Mbd3l1Q9D9H3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.21□□□□□ -0.13
Mbd3l1Q9D9H3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mbd3l1Q9D9H3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms