Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp5Q9D7S9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.56■□□□□ 0.88
Chmp5Q9D7S9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.56■□□□□ 0.88
Chmp5Q9D7S9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp5Q9D7S9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp5Q9D7S9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Chmp5Q9D7S9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp5Q9D7S9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Chmp5Q9D7S9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp5Q9D7S9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Chmp5Q9D7S9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp5Q9D7S9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp5Q9D7S9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp5Q9D7S9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp5Q9D7S9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.55■□□□□ 0.88
Chmp5Q9D7S9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp5Q9D7S9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp5Q9D7S9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp5Q9D7S9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.55■□□□□ 0.88
Chmp5Q9D7S9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Chmp5Q9D7S9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Chmp5Q9D7S9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp5Q9D7S9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Chmp5Q9D7S9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp5Q9D7S9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp5Q9D7S9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp5Q9D7S9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp5Q9D7S9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp5Q9D7S9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp5Q9D7S9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp5Q9D7S9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp5Q9D7S9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp5Q9D7S9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.54■□□□□ 0.88
Chmp5Q9D7S9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Chmp5Q9D7S9 Gm7791-201ENSMUST00000219066 539 ntBASIC20.54■□□□□ 0.88
Chmp5Q9D7S9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp5Q9D7S9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp5Q9D7S9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp5Q9D7S9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp5Q9D7S9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp5Q9D7S9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp5Q9D7S9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp5Q9D7S9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp5Q9D7S9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp5Q9D7S9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Prob1-201ENSMUST00000097619 3021 ntBASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp5Q9D7S9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC20.52■□□□□ 0.88
Chmp5Q9D7S9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Chmp5Q9D7S9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp5Q9D7S9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp5Q9D7S9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp5Q9D7S9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.52■□□□□ 0.88
Chmp5Q9D7S9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.52■□□□□ 0.88
Chmp5Q9D7S9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.52■□□□□ 0.88
Chmp5Q9D7S9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.52■□□□□ 0.88
Chmp5Q9D7S9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp5Q9D7S9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp5Q9D7S9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp5Q9D7S9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp5Q9D7S9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp5Q9D7S9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chmp5Q9D7S9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chmp5Q9D7S9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC20.52■□□□□ 0.87
Chmp5Q9D7S9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chmp5Q9D7S9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chmp5Q9D7S9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC20.51■□□□□ 0.87
Chmp5Q9D7S9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp5Q9D7S9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp5Q9D7S9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp5Q9D7S9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.51■□□□□ 0.87
Chmp5Q9D7S9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp5Q9D7S9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC20.51■□□□□ 0.87
Chmp5Q9D7S9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.51■□□□□ 0.87
Chmp5Q9D7S9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp5Q9D7S9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp5Q9D7S9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp5Q9D7S9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp5Q9D7S9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp5Q9D7S9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp5Q9D7S9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp5Q9D7S9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC20.51■□□□□ 0.87
Chmp5Q9D7S9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms