Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Gm14928-201ENSMUST00000120198 477 ntBASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Gm17837-201ENSMUST00000186435 985 ntBASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lysmd1Q9D0E3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lysmd1Q9D0E3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lysmd1Q9D0E3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lysmd1Q9D0E3 Gm44855-201ENSMUST00000205725 362 ntBASIC17.52■□□□□ 0.4
Lysmd1Q9D0E3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lysmd1Q9D0E3 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.52■□□□□ 0.4
Lysmd1Q9D0E3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lysmd1Q9D0E3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Lysmd1Q9D0E3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.52■□□□□ 0.39
Lysmd1Q9D0E3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lysmd1Q9D0E3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd1Q9D0E3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd1Q9D0E3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd1Q9D0E3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd1Q9D0E3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd1Q9D0E3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd1Q9D0E3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd1Q9D0E3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd1Q9D0E3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Lysmd1Q9D0E3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.5■□□□□ 0.39
Lysmd1Q9D0E3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd1Q9D0E3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd1Q9D0E3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd1Q9D0E3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd1Q9D0E3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Lysmd1Q9D0E3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Lysmd1Q9D0E3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd1Q9D0E3 Gm16215-201ENSMUST00000161990 637 ntBASIC17.49■□□□□ 0.39
Lysmd1Q9D0E3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.49■□□□□ 0.39
Lysmd1Q9D0E3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd1Q9D0E3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd1Q9D0E3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd1Q9D0E3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.49■□□□□ 0.39
Lysmd1Q9D0E3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd1Q9D0E3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.49■□□□□ 0.39
Lysmd1Q9D0E3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.49■□□□□ 0.39
Lysmd1Q9D0E3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.49■□□□□ 0.39
Lysmd1Q9D0E3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd1Q9D0E3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd1Q9D0E3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Lysmd1Q9D0E3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd1Q9D0E3 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.49■□□□□ 0.39
Lysmd1Q9D0E3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.48■□□□□ 0.39
Lysmd1Q9D0E3 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.48■□□□□ 0.39
Lysmd1Q9D0E3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.48■□□□□ 0.39
Lysmd1Q9D0E3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd1Q9D0E3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd1Q9D0E3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.48■□□□□ 0.39
Lysmd1Q9D0E3 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.48■□□□□ 0.39
Lysmd1Q9D0E3 Gm11478-201ENSMUST00000117851 599 ntBASIC17.48■□□□□ 0.39
Lysmd1Q9D0E3 Gm28631-201ENSMUST00000190740 334 ntBASIC17.48■□□□□ 0.39
Lysmd1Q9D0E3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 108.1 ms