Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdhd3Q9CYW4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hdhd3Q9CYW4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdhd3Q9CYW4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hdhd3Q9CYW4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hdhd3Q9CYW4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hdhd3Q9CYW4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.4□□□□□ -0.26
Hdhd3Q9CYW4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Hdhd3Q9CYW4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Prob1-201ENSMUST00000097619 3021 ntBASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Dio3-201ENSMUST00000097228 1449 ntBASIC13.39□□□□□ -0.27
Hdhd3Q9CYW4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms