Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Gm6991-201ENSMUST00000218475 1178 ntBASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retreg3Q9CQV4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Gm44136-201ENSMUST00000203819 1106 ntBASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Retreg3Q9CQV4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Gm27704-201ENSMUST00000185094 107 ntBASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms