Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim11Q99PQ2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim11Q99PQ2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim11Q99PQ2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Trim11Q99PQ2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Trim11Q99PQ2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim11Q99PQ2 Mir1668-201ENSMUST00000184114 107 ntBASIC18.7■□□□□ 0.58
Trim11Q99PQ2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim11Q99PQ2 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.7■□□□□ 0.58
Trim11Q99PQ2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim11Q99PQ2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim11Q99PQ2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Trim11Q99PQ2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim11Q99PQ2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim11Q99PQ2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trim11Q99PQ2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Mir5130-201ENSMUST00000175160 84 ntBASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Gm7889-201ENSMUST00000185591 958 ntBASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Gm18421-201ENSMUST00000204122 625 ntBASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Gm10566-201ENSMUST00000086739 996 ntBASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim11Q99PQ2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Gm45058-201ENSMUST00000205810 766 ntBASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim11Q99PQ2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Gm11336-201ENSMUST00000118168 334 ntBASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Gm43799-201ENSMUST00000201845 579 ntBASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Gm18959-201ENSMUST00000208954 655 ntBASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim11Q99PQ2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim11Q99PQ2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim11Q99PQ2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim11Q99PQ2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim11Q99PQ2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.66■□□□□ 0.58
Trim11Q99PQ2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.66■□□□□ 0.58
Trim11Q99PQ2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim11Q99PQ2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim11Q99PQ2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim11Q99PQ2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim11Q99PQ2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim11Q99PQ2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms