Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim16Q99PP9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim16Q99PP9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trim16Q99PP9 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.07■□□□□ 0.16
Trim16Q99PP9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.07■□□□□ 0.16
Trim16Q99PP9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Trim16Q99PP9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.06■□□□□ 0.16
Trim16Q99PP9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.06■□□□□ 0.16
Trim16Q99PP9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim16Q99PP9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim16Q99PP9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim16Q99PP9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.05■□□□□ 0.16
Trim16Q99PP9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim16Q99PP9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.05■□□□□ 0.16
Trim16Q99PP9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.05■□□□□ 0.16
Trim16Q99PP9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim16Q99PP9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim16Q99PP9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.05■□□□□ 0.16
Trim16Q99PP9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.05■□□□□ 0.16
Trim16Q99PP9 Gm2274-201ENSMUST00000184539 609 ntBASIC16.05■□□□□ 0.16
Trim16Q99PP9 Mir7071-201ENSMUST00000184847 69 ntBASIC16.05■□□□□ 0.16
Trim16Q99PP9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim16Q99PP9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim16Q99PP9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim16Q99PP9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim16Q99PP9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trim16Q99PP9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim16Q99PP9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.04■□□□□ 0.16
Trim16Q99PP9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Gm7370-201ENSMUST00000219471 767 ntBASIC16.04■□□□□ 0.16
Trim16Q99PP9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms