Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34aQ99PP6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
Trim34aQ99PP6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34aQ99PP6 Gm43073-201ENSMUST00000198200 1189 ntBASIC20.21■□□□□ 0.83
Trim34aQ99PP6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34aQ99PP6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34aQ99PP6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34aQ99PP6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34aQ99PP6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Trim34aQ99PP6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34aQ99PP6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34aQ99PP6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34aQ99PP6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34aQ99PP6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34aQ99PP6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34aQ99PP6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim34aQ99PP6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Trim34aQ99PP6 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.2■□□□□ 0.82
Trim34aQ99PP6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim34aQ99PP6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim34aQ99PP6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim34aQ99PP6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim34aQ99PP6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.2■□□□□ 0.82
Trim34aQ99PP6 Gm12497-201ENSMUST00000138778 237 ntBASIC20.2■□□□□ 0.82
Trim34aQ99PP6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
Trim34aQ99PP6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.2■□□□□ 0.82
Trim34aQ99PP6 Gm5364-201ENSMUST00000216789 889 ntBASIC20.2■□□□□ 0.82
Trim34aQ99PP6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim34aQ99PP6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim34aQ99PP6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34aQ99PP6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trim34aQ99PP6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34aQ99PP6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34aQ99PP6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34aQ99PP6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34aQ99PP6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34aQ99PP6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34aQ99PP6 Gm15173-201ENSMUST00000122049 433 ntBASIC20.19■□□□□ 0.82
Trim34aQ99PP6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34aQ99PP6 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34aQ99PP6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34aQ99PP6 Gm8000-201ENSMUST00000188378 592 ntBASIC20.19■□□□□ 0.82
Trim34aQ99PP6 Gm36967-201ENSMUST00000193814 266 ntBASIC20.19■□□□□ 0.82
Trim34aQ99PP6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34aQ99PP6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34aQ99PP6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34aQ99PP6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34aQ99PP6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34aQ99PP6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Trim34aQ99PP6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34aQ99PP6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.19■□□□□ 0.82
Trim34aQ99PP6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34aQ99PP6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34aQ99PP6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34aQ99PP6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34aQ99PP6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34aQ99PP6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34aQ99PP6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trim34aQ99PP6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34aQ99PP6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34aQ99PP6 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.18■□□□□ 0.82
Trim34aQ99PP6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34aQ99PP6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34aQ99PP6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Trim34aQ99PP6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.18■□□□□ 0.82
Trim34aQ99PP6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34aQ99PP6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34aQ99PP6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34aQ99PP6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34aQ99PP6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34aQ99PP6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Trim34aQ99PP6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Trim34aQ99PP6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34aQ99PP6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34aQ99PP6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trim34aQ99PP6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34aQ99PP6 Gm4459-201ENSMUST00000118750 468 ntBASIC20.17■□□□□ 0.82
Trim34aQ99PP6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34aQ99PP6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.17■□□□□ 0.82
Trim34aQ99PP6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34aQ99PP6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34aQ99PP6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34aQ99PP6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Trim34aQ99PP6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34aQ99PP6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34aQ99PP6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34aQ99PP6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34aQ99PP6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Trim34aQ99PP6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34aQ99PP6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34aQ99PP6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34aQ99PP6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34aQ99PP6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34aQ99PP6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34aQ99PP6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34aQ99PP6 Gm8097-201ENSMUST00000117903 829 ntBASIC20.16■□□□□ 0.82
Trim34aQ99PP6 Gm8349-201ENSMUST00000182720 1003 ntBASIC20.16■□□□□ 0.82
Trim34aQ99PP6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC20.16■□□□□ 0.82
Trim34aQ99PP6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34aQ99PP6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms