Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.67■□□□□ 0.26
Cdh23Q99PF4 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Cdh23Q99PF4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cdh23Q99PF4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.67■□□□□ 0.26
Cdh23Q99PF4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh23Q99PF4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh23Q99PF4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cdh23Q99PF4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh23Q99PF4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh23Q99PF4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.66■□□□□ 0.26
Cdh23Q99PF4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.66■□□□□ 0.26
Cdh23Q99PF4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Gm27622-201ENSMUST00000183779 60 ntBASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.66■□□□□ 0.26
Cdh23Q99PF4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh23Q99PF4 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh23Q99PF4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh23Q99PF4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cdh23Q99PF4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.65■□□□□ 0.26
Cdh23Q99PF4 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.65■□□□□ 0.26
Cdh23Q99PF4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh23Q99PF4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh23Q99PF4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh23Q99PF4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cdh23Q99PF4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh23Q99PF4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.65■□□□□ 0.26
Cdh23Q99PF4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh23Q99PF4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdh23Q99PF4 Gm14127-201ENSMUST00000117906 678 ntBASIC16.64■□□□□ 0.26
Cdh23Q99PF4 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.64■□□□□ 0.26
Cdh23Q99PF4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Gm9172-201ENSMUST00000212092 954 ntBASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Mir6990-201ENSMUST00000183724 91 ntBASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdh23Q99PF4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.63■□□□□ 0.25
Cdh23Q99PF4 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.63■□□□□ 0.25
Cdh23Q99PF4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh23Q99PF4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.63■□□□□ 0.25
Cdh23Q99PF4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Cdh23Q99PF4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh23Q99PF4 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh23Q99PF4 Gm13365-201ENSMUST00000121188 973 ntBASIC16.63■□□□□ 0.25
Cdh23Q99PF4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.63■□□□□ 0.25
Cdh23Q99PF4 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh23Q99PF4 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh23Q99PF4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cdh23Q99PF4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Cdh23Q99PF4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.63■□□□□ 0.25
Cdh23Q99PF4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh23Q99PF4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh23Q99PF4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cdh23Q99PF4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh23Q99PF4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh23Q99PF4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms