Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Gm7514-201ENSMUST00000209475 934 ntBASIC14.07□□□□□ -0.16
Smim3Q99PE5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smim3Q99PE5 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.06□□□□□ -0.16
Smim3Q99PE5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.06□□□□□ -0.16
Smim3Q99PE5 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smim3Q99PE5 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.06□□□□□ -0.16
Smim3Q99PE5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim3Q99PE5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smim3Q99PE5 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.04□□□□□ -0.16
Smim3Q99PE5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms