Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col25a1Q99MQ5 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col25a1Q99MQ5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Col25a1Q99MQ5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Col25a1Q99MQ5 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col25a1Q99MQ5 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Col25a1Q99MQ5 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.98■□□□□ 0.31
Col25a1Q99MQ5 Mir6977-201ENSMUST00000184960 64 ntBASIC16.98■□□□□ 0.31
Col25a1Q99MQ5 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.98■□□□□ 0.31
Col25a1Q99MQ5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col25a1Q99MQ5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Col25a1Q99MQ5 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col25a1Q99MQ5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col25a1Q99MQ5 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col25a1Q99MQ5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col25a1Q99MQ5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col25a1Q99MQ5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col25a1Q99MQ5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col25a1Q99MQ5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col25a1Q99MQ5 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col25a1Q99MQ5 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col25a1Q99MQ5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col25a1Q99MQ5 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.97■□□□□ 0.31
Col25a1Q99MQ5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.97■□□□□ 0.31
Col25a1Q99MQ5 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.97■□□□□ 0.31
Col25a1Q99MQ5 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col25a1Q99MQ5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col25a1Q99MQ5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col25a1Q99MQ5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.97■□□□□ 0.31
Col25a1Q99MQ5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col25a1Q99MQ5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col25a1Q99MQ5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col25a1Q99MQ5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col25a1Q99MQ5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col25a1Q99MQ5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col25a1Q99MQ5 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Col25a1Q99MQ5 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.96■□□□□ 0.31
Col25a1Q99MQ5 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col25a1Q99MQ5 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col25a1Q99MQ5 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col25a1Q99MQ5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Col25a1Q99MQ5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col25a1Q99MQ5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col25a1Q99MQ5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col25a1Q99MQ5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col25a1Q99MQ5 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Col25a1Q99MQ5 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.95■□□□□ 0.3
Col25a1Q99MQ5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col25a1Q99MQ5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Col25a1Q99MQ5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col25a1Q99MQ5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col25a1Q99MQ5 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col25a1Q99MQ5 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.94■□□□□ 0.3
Col25a1Q99MQ5 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col25a1Q99MQ5 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.94■□□□□ 0.3
Col25a1Q99MQ5 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.94■□□□□ 0.3
Col25a1Q99MQ5 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.94■□□□□ 0.3
Col25a1Q99MQ5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col25a1Q99MQ5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Col25a1Q99MQ5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Col25a1Q99MQ5 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col25a1Q99MQ5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col25a1Q99MQ5 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col25a1Q99MQ5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col25a1Q99MQ5 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.94■□□□□ 0.3
Col25a1Q99MQ5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 Idnk-204ENSMUST00000226010 1898 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms