Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tlr3Q99MB1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.61■□□□□ 0.41
Tlr3Q99MB1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tlr3Q99MB1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tlr3Q99MB1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Tlr3Q99MB1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tlr3Q99MB1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tlr3Q99MB1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Tlr3Q99MB1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tlr3Q99MB1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tlr3Q99MB1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.61■□□□□ 0.41
Tlr3Q99MB1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tlr3Q99MB1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tlr3Q99MB1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tlr3Q99MB1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tlr3Q99MB1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tlr3Q99MB1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr3Q99MB1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tlr3Q99MB1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Tlr3Q99MB1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Tlr3Q99MB1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Tlr3Q99MB1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tlr3Q99MB1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tlr3Q99MB1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms