Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Scrt1Q99M85 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Mir5131-201ENSMUST00000175426 93 ntBASIC14.35□□□□□ -0.11
Scrt1Q99M85 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scrt1Q99M85 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Idnk-204ENSMUST00000226010 1898 ntBASIC14.34□□□□□ -0.11
Scrt1Q99M85 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.34□□□□□ -0.11
Scrt1Q99M85 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.34□□□□□ -0.11
Scrt1Q99M85 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Scrt1Q99M85 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scrt1Q99M85 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scrt1Q99M85 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.33□□□□□ -0.11
Scrt1Q99M85 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.33□□□□□ -0.11
Scrt1Q99M85 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.33□□□□□ -0.11
Scrt1Q99M85 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Scrt1Q99M85 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scrt1Q99M85 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scrt1Q99M85 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.33□□□□□ -0.11
Scrt1Q99M85 Phf7-203ENSMUST00000226565 1971 ntBASIC14.33□□□□□ -0.12
Scrt1Q99M85 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scrt1Q99M85 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scrt1Q99M85 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scrt1Q99M85 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.33□□□□□ -0.12
Scrt1Q99M85 Gm6376-201ENSMUST00000209407 580 ntBASIC14.33□□□□□ -0.12
Scrt1Q99M85 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.33□□□□□ -0.12
Scrt1Q99M85 Gm6296-201ENSMUST00000222599 943 ntBASIC14.33□□□□□ -0.12
Scrt1Q99M85 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scrt1Q99M85 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Scrt1Q99M85 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Scrt1Q99M85 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scrt1Q99M85 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.33□□□□□ -0.12
Scrt1Q99M85 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.33□□□□□ -0.12
Scrt1Q99M85 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Scrt1Q99M85 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scrt1Q99M85 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scrt1Q99M85 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scrt1Q99M85 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms