Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Haglr-201ENSMUST00000100000 2085 ntBASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Clcc1Q99LI2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Birc2-201ENSMUST00000054878 378 ntBASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcc1Q99LI2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcc1Q99LI2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Gm43347-201ENSMUST00000200226 580 ntBASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Gm5864-201ENSMUST00000202263 970 ntBASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Clcc1Q99LI2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms