Protein–RNA interactions for Protein: Q99KR6

Rnf34, E3 ubiquitin-protein ligase RNF34, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf34Q99KR6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Gm7638-201ENSMUST00000121348 967 ntBASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf34Q99KR6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
Rnf34Q99KR6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf34Q99KR6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Rnf34Q99KR6 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Gm12527-201ENSMUST00000117967 564 ntBASIC17.64■□□□□ 0.41
Rnf34Q99KR6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf34Q99KR6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf34Q99KR6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rnf34Q99KR6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rnf34Q99KR6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf34Q99KR6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf34Q99KR6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.63■□□□□ 0.41
Rnf34Q99KR6 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.63■□□□□ 0.41
Rnf34Q99KR6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf34Q99KR6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf34Q99KR6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf34Q99KR6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf34Q99KR6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Rnf34Q99KR6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf34Q99KR6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf34Q99KR6 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf34Q99KR6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf34Q99KR6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.63■□□□□ 0.41
Rnf34Q99KR6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rnf34Q99KR6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rnf34Q99KR6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf34Q99KR6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf34Q99KR6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf34Q99KR6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf34Q99KR6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf34Q99KR6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Rnf34Q99KR6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf34Q99KR6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf34Q99KR6 Gm18958-201ENSMUST00000174258 762 ntBASIC17.62■□□□□ 0.41
Rnf34Q99KR6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.62■□□□□ 0.41
Rnf34Q99KR6 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.62■□□□□ 0.41
Rnf34Q99KR6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf34Q99KR6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf34Q99KR6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.62■□□□□ 0.41
Rnf34Q99KR6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf34Q99KR6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf34Q99KR6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf34Q99KR6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf34Q99KR6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf34Q99KR6 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.62■□□□□ 0.41
Rnf34Q99KR6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf34Q99KR6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf34Q99KR6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf34Q99KR6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf34Q99KR6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf34Q99KR6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf34Q99KR6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms