Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.89■□□□□ 0.61
Rfc4Q99J62 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc4Q99J62 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc4Q99J62 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rfc4Q99J62 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Gm15467-201ENSMUST00000120582 445 ntBASIC18.88■□□□□ 0.61
Rfc4Q99J62 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc4Q99J62 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rfc4Q99J62 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc4Q99J62 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rfc4Q99J62 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc4Q99J62 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc4Q99J62 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc4Q99J62 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc4Q99J62 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc4Q99J62 Gm15173-201ENSMUST00000122049 433 ntBASIC18.87■□□□□ 0.61
Rfc4Q99J62 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc4Q99J62 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc4Q99J62 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc4Q99J62 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc4Q99J62 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.87■□□□□ 0.61
Rfc4Q99J62 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc4Q99J62 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.87■□□□□ 0.61
Rfc4Q99J62 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc4Q99J62 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc4Q99J62 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc4Q99J62 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc4Q99J62 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc4Q99J62 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rfc4Q99J62 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc4Q99J62 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc4Q99J62 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc4Q99J62 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc4Q99J62 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rfc4Q99J62 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc4Q99J62 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc4Q99J62 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc4Q99J62 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc4Q99J62 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rfc4Q99J62 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rfc4Q99J62 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfc4Q99J62 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfc4Q99J62 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfc4Q99J62 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfc4Q99J62 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rfc4Q99J62 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.85■□□□□ 0.61
Rfc4Q99J62 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfc4Q99J62 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfc4Q99J62 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfc4Q99J62 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc4Q99J62 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.84■□□□□ 0.61
Rfc4Q99J62 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.84■□□□□ 0.61
Rfc4Q99J62 Gm27702-201ENSMUST00000184512 56 ntBASIC18.84■□□□□ 0.61
Rfc4Q99J62 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Gm15590-201ENSMUST00000078419 552 ntBASIC18.84■□□□□ 0.61
Rfc4Q99J62 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc4Q99J62 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms