Protein–RNA interactions for Protein: Q925H1

Trps1, Zinc finger transcription factor Trps1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trps1Q925H1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trps1Q925H1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trps1Q925H1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trps1Q925H1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trps1Q925H1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trps1Q925H1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trps1Q925H1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Trps1Q925H1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Trps1Q925H1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.02■□□□□ 0.31
Trps1Q925H1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trps1Q925H1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trps1Q925H1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trps1Q925H1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trps1Q925H1 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.01■□□□□ 0.31
Trps1Q925H1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trps1Q925H1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trps1Q925H1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trps1Q925H1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trps1Q925H1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trps1Q925H1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trps1Q925H1 Mir770-201ENSMUST00000103252 94 ntBASIC17.01■□□□□ 0.31
Trps1Q925H1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trps1Q925H1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trps1Q925H1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.01■□□□□ 0.31
Trps1Q925H1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trps1Q925H1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trps1Q925H1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trps1Q925H1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trps1Q925H1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trps1Q925H1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trps1Q925H1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trps1Q925H1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Trps1Q925H1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trps1Q925H1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trps1Q925H1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trps1Q925H1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trps1Q925H1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17■□□□□ 0.31
Trps1Q925H1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trps1Q925H1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Trps1Q925H1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17■□□□□ 0.31
Trps1Q925H1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trps1Q925H1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trps1Q925H1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trps1Q925H1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trps1Q925H1 Gm14464-201ENSMUST00000119658 1254 ntBASIC17■□□□□ 0.31
Trps1Q925H1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trps1Q925H1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trps1Q925H1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trps1Q925H1 Gm5587-201ENSMUST00000206270 674 ntBASIC17■□□□□ 0.31
Trps1Q925H1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trps1Q925H1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trps1Q925H1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trps1Q925H1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trps1Q925H1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trps1Q925H1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trps1Q925H1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trps1Q925H1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trps1Q925H1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17■□□□□ 0.31
Trps1Q925H1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trps1Q925H1 Hivep3-201ENSMUST00000084306 2973 ntBASIC17■□□□□ 0.31
Trps1Q925H1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trps1Q925H1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trps1Q925H1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trps1Q925H1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trps1Q925H1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trps1Q925H1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trps1Q925H1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trps1Q925H1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trps1Q925H1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.99■□□□□ 0.31
Trps1Q925H1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trps1Q925H1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trps1Q925H1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trps1Q925H1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trps1Q925H1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.99■□□□□ 0.31
Trps1Q925H1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trps1Q925H1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trps1Q925H1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.99■□□□□ 0.31
Trps1Q925H1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trps1Q925H1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trps1Q925H1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trps1Q925H1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.99■□□□□ 0.31
Trps1Q925H1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trps1Q925H1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Trps1Q925H1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.99■□□□□ 0.31
Trps1Q925H1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trps1Q925H1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trps1Q925H1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trps1Q925H1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trps1Q925H1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trps1Q925H1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trps1Q925H1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trps1Q925H1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trps1Q925H1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trps1Q925H1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trps1Q925H1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trps1Q925H1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trps1Q925H1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trps1Q925H1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trps1Q925H1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trps1Q925H1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms