Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb2Q91Y00 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb2Q91Y00 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb2Q91Y00 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb2Q91Y00 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Gm27742-201ENSMUST00000184667 60 ntBASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb2Q91Y00 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb2Q91Y00 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb2Q91Y00 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb2Q91Y00 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb2Q91Y00 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdhb2Q91Y00 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb2Q91Y00 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb2Q91Y00 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb2Q91Y00 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb2Q91Y00 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb2Q91Y00 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdhb2Q91Y00 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb2Q91Y00 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb2Q91Y00 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb2Q91Y00 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb2Q91Y00 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhb2Q91Y00 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb2Q91Y00 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb2Q91Y00 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb2Q91Y00 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb2Q91Y00 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb2Q91Y00 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb2Q91Y00 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb2Q91Y00 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms