Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb22Q91XZ8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhb22Q91XZ8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Pcdhb22Q91XZ8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhb22Q91XZ8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhb22Q91XZ8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhb22Q91XZ8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb22Q91XZ8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb22Q91XZ8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb22Q91XZ8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pcdhb22Q91XZ8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb22Q91XZ8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb22Q91XZ8 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.14■□□□□ 0.65
Pcdhb22Q91XZ8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.14■□□□□ 0.65
Pcdhb22Q91XZ8 Gm27704-201ENSMUST00000185094 107 ntBASIC19.14■□□□□ 0.65
Pcdhb22Q91XZ8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Pcdhb22Q91XZ8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb22Q91XZ8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb22Q91XZ8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb22Q91XZ8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb22Q91XZ8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.13■□□□□ 0.65
Pcdhb22Q91XZ8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb22Q91XZ8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb22Q91XZ8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb22Q91XZ8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb22Q91XZ8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb22Q91XZ8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhb22Q91XZ8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdhb22Q91XZ8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhb22Q91XZ8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb22Q91XZ8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb22Q91XZ8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb22Q91XZ8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb22Q91XZ8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb22Q91XZ8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhb22Q91XZ8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb22Q91XZ8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb22Q91XZ8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb22Q91XZ8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdhb22Q91XZ8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb22Q91XZ8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb22Q91XZ8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb22Q91XZ8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
Pcdhb22Q91XZ8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb22Q91XZ8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb22Q91XZ8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb22Q91XZ8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Pcdhb22Q91XZ8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.12■□□□□ 0.65
Pcdhb22Q91XZ8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb22Q91XZ8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb22Q91XZ8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb22Q91XZ8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Pcdhb22Q91XZ8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb22Q91XZ8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Pcdhb22Q91XZ8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb22Q91XZ8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Pcdhb22Q91XZ8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb22Q91XZ8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb22Q91XZ8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb22Q91XZ8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb22Q91XZ8 Gm27742-201ENSMUST00000184667 60 ntBASIC19.11■□□□□ 0.65
Pcdhb22Q91XZ8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Pcdhb22Q91XZ8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb22Q91XZ8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb22Q91XZ8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb22Q91XZ8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pcdhb22Q91XZ8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pcdhb22Q91XZ8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb22Q91XZ8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb22Q91XZ8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb22Q91XZ8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb22Q91XZ8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb22Q91XZ8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Pcdhb22Q91XZ8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb22Q91XZ8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb22Q91XZ8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pcdhb22Q91XZ8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms