Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhb5Q91XZ5 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Gm4535-201ENSMUST00000182274 558 ntBASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Gm10355-201ENSMUST00000097146 517 ntBASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb5Q91XZ5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb5Q91XZ5 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb5Q91XZ5 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.29■□□□□ 0.68
Pcdhb5Q91XZ5 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhb5Q91XZ5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb5Q91XZ5 Gm13418-201ENSMUST00000119097 944 ntBASIC19.29■□□□□ 0.68
Pcdhb5Q91XZ5 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhb5Q91XZ5 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.29■□□□□ 0.68
Pcdhb5Q91XZ5 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.29■□□□□ 0.68
Pcdhb5Q91XZ5 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb5Q91XZ5 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb5Q91XZ5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb5Q91XZ5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb5Q91XZ5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.28■□□□□ 0.68
Pcdhb5Q91XZ5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhb5Q91XZ5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb5Q91XZ5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb5Q91XZ5 Gm25990-201ENSMUST00000102440 86 ntBASIC19.28■□□□□ 0.68
Pcdhb5Q91XZ5 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.28■□□□□ 0.68
Pcdhb5Q91XZ5 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.28■□□□□ 0.68
Pcdhb5Q91XZ5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcdhb5Q91XZ5 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb5Q91XZ5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb5Q91XZ5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb5Q91XZ5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb5Q91XZ5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb5Q91XZ5 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhb5Q91XZ5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb5Q91XZ5 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb5Q91XZ5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb5Q91XZ5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhb5Q91XZ5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb5Q91XZ5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb5Q91XZ5 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhb5Q91XZ5 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb5Q91XZ5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcdhb5Q91XZ5 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.27■□□□□ 0.68
Pcdhb5Q91XZ5 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb5Q91XZ5 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb5Q91XZ5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb5Q91XZ5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb5Q91XZ5 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Pcdhb5Q91XZ5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.27■□□□□ 0.67
Pcdhb5Q91XZ5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.27■□□□□ 0.67
Pcdhb5Q91XZ5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb5Q91XZ5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb5Q91XZ5 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb5Q91XZ5 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb5Q91XZ5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms