Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb6Q91XZ4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb6Q91XZ4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb6Q91XZ4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.85■□□□□ 0.29
Pcdhb6Q91XZ4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms