Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.87■□□□□ 0.13
Pcdhga11Q91XY8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga11Q91XY8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdhga11Q91XY8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhga11Q91XY8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga11Q91XY8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga11Q91XY8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhga11Q91XY8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhga11Q91XY8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhga11Q91XY8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.83■□□□□ 0.13
Pcdhga11Q91XY8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhga11Q91XY8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga11Q91XY8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga11Q91XY8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.83■□□□□ 0.12
Pcdhga11Q91XY8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga11Q91XY8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdhga11Q91XY8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga11Q91XY8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga11Q91XY8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga11Q91XY8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga11Q91XY8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga11Q91XY8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga11Q91XY8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga11Q91XY8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga11Q91XY8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga11Q91XY8 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.82■□□□□ 0.12
Pcdhga11Q91XY8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms