Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhgc3Q91XX1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhgc3Q91XX1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhgc3Q91XX1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Pcdhgc3Q91XX1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhgc3Q91XX1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhgc3Q91XX1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhgc3Q91XX1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhgc3Q91XX1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhgc3Q91XX1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pcdhgc3Q91XX1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhgc3Q91XX1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhgc3Q91XX1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhgc3Q91XX1 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhgc3Q91XX1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhgc3Q91XX1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhgc3Q91XX1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Gm12441-201ENSMUST00000121806 588 ntBASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Gm4968-201ENSMUST00000071458 858 ntBASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhgc3Q91XX1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhgc3Q91XX1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgc3Q91XX1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgc3Q91XX1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdhgc3Q91XX1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgc3Q91XX1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgc3Q91XX1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.54■□□□□ 0.08
Pcdhgc3Q91XX1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgc3Q91XX1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgc3Q91XX1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgc3Q91XX1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgc3Q91XX1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgc3Q91XX1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgc3Q91XX1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgc3Q91XX1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgc3Q91XX1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgc3Q91XX1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgc3Q91XX1 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Gm10138-203ENSMUST00000206952 366 ntBASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgc3Q91XX1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhgc3Q91XX1 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.52■□□□□ 0.08
Pcdhgc3Q91XX1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgc3Q91XX1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgc3Q91XX1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgc3Q91XX1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgc3Q91XX1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgc3Q91XX1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgc3Q91XX1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgc3Q91XX1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgc3Q91XX1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhgc3Q91XX1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgc3Q91XX1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms