Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trex1Q91XB0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
Trex1Q91XB0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trex1Q91XB0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trex1Q91XB0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trex1Q91XB0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trex1Q91XB0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trex1Q91XB0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trex1Q91XB0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trex1Q91XB0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trex1Q91XB0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.76■□□□□ 0.59
Trex1Q91XB0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Trex1Q91XB0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.76■□□□□ 0.59
Trex1Q91XB0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trex1Q91XB0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.76■□□□□ 0.59
Trex1Q91XB0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trex1Q91XB0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trex1Q91XB0 Gm5867-201ENSMUST00000063197 592 ntBASIC18.76■□□□□ 0.59
Trex1Q91XB0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trex1Q91XB0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trex1Q91XB0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trex1Q91XB0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trex1Q91XB0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.76■□□□□ 0.59
Trex1Q91XB0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
Trex1Q91XB0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.75■□□□□ 0.59
Trex1Q91XB0 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.75■□□□□ 0.59
Trex1Q91XB0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trex1Q91XB0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trex1Q91XB0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trex1Q91XB0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trex1Q91XB0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trex1Q91XB0 Gm4459-201ENSMUST00000118750 468 ntBASIC18.75■□□□□ 0.59
Trex1Q91XB0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trex1Q91XB0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.75■□□□□ 0.59
Trex1Q91XB0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trex1Q91XB0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.75■□□□□ 0.59
Trex1Q91XB0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.75■□□□□ 0.59
Trex1Q91XB0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trex1Q91XB0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trex1Q91XB0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trex1Q91XB0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trex1Q91XB0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trex1Q91XB0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trex1Q91XB0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trex1Q91XB0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Trex1Q91XB0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Trex1Q91XB0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trex1Q91XB0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Trex1Q91XB0 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.74■□□□□ 0.59
Trex1Q91XB0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trex1Q91XB0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trex1Q91XB0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.74■□□□□ 0.59
Trex1Q91XB0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trex1Q91XB0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.74■□□□□ 0.59
Trex1Q91XB0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trex1Q91XB0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.74■□□□□ 0.59
Trex1Q91XB0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.74■□□□□ 0.59
Trex1Q91XB0 Mir5126-201ENSMUST00000175513 77 ntBASIC18.74■□□□□ 0.59
Trex1Q91XB0 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.74■□□□□ 0.59
Trex1Q91XB0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.74■□□□□ 0.59
Trex1Q91XB0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trex1Q91XB0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trex1Q91XB0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trex1Q91XB0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trex1Q91XB0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trex1Q91XB0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trex1Q91XB0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.73■□□□□ 0.59
Trex1Q91XB0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trex1Q91XB0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trex1Q91XB0 Gm12497-201ENSMUST00000138778 237 ntBASIC18.73■□□□□ 0.59
Trex1Q91XB0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.73■□□□□ 0.59
Trex1Q91XB0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trex1Q91XB0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trex1Q91XB0 Gm7230-201ENSMUST00000173026 815 ntBASIC18.73■□□□□ 0.59
Trex1Q91XB0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.73■□□□□ 0.59
Trex1Q91XB0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trex1Q91XB0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trex1Q91XB0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trex1Q91XB0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trex1Q91XB0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trex1Q91XB0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Trex1Q91XB0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trex1Q91XB0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trex1Q91XB0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.73■□□□□ 0.59
Trex1Q91XB0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trex1Q91XB0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.73■□□□□ 0.59
Trex1Q91XB0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trex1Q91XB0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trex1Q91XB0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Gm8097-201ENSMUST00000117903 829 ntBASIC18.72■□□□□ 0.59
Trex1Q91XB0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Gm15173-201ENSMUST00000122049 433 ntBASIC18.72■□□□□ 0.59
Trex1Q91XB0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.72■□□□□ 0.59
Trex1Q91XB0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.72■□□□□ 0.59
Trex1Q91XB0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms