Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vsx1Q91V10 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.21■□□□□ 0.19
Vsx1Q91V10 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vsx1Q91V10 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vsx1Q91V10 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vsx1Q91V10 Gm24513-201ENSMUST00000174964 138 ntBASIC16.21■□□□□ 0.19
Vsx1Q91V10 Auts2-212ENSMUST00000178555 309 ntBASIC16.21■□□□□ 0.19
Vsx1Q91V10 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.21■□□□□ 0.19
Vsx1Q91V10 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.21■□□□□ 0.19
Vsx1Q91V10 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.21■□□□□ 0.19
Vsx1Q91V10 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.21■□□□□ 0.19
Vsx1Q91V10 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.21■□□□□ 0.19
Vsx1Q91V10 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vsx1Q91V10 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Vsx1Q91V10 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vsx1Q91V10 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vsx1Q91V10 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vsx1Q91V10 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Vsx1Q91V10 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.21■□□□□ 0.19
Vsx1Q91V10 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vsx1Q91V10 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vsx1Q91V10 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vsx1Q91V10 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.2■□□□□ 0.18
Vsx1Q91V10 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Gm29707-201ENSMUST00000196325 491 ntBASIC16.2■□□□□ 0.18
Vsx1Q91V10 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Gm18421-201ENSMUST00000204122 625 ntBASIC16.2■□□□□ 0.18
Vsx1Q91V10 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.2■□□□□ 0.18
Vsx1Q91V10 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vsx1Q91V10 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Vsx1Q91V10 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Vsx1Q91V10 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vsx1Q91V10 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vsx1Q91V10 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vsx1Q91V10 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vsx1Q91V10 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Vsx1Q91V10 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vsx1Q91V10 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Vsx1Q91V10 Gm27397-201ENSMUST00000184997 107 ntBASIC16.19■□□□□ 0.18
Vsx1Q91V10 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vsx1Q91V10 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Vsx1Q91V10 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vsx1Q91V10 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vsx1Q91V10 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vsx1Q91V10 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.19■□□□□ 0.18
Vsx1Q91V10 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vsx1Q91V10 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vsx1Q91V10 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vsx1Q91V10 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vsx1Q91V10 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.18■□□□□ 0.18
Vsx1Q91V10 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.18■□□□□ 0.18
Vsx1Q91V10 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Vsx1Q91V10 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vsx1Q91V10 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms