Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhb11Q91UZ8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Pcdhb11Q91UZ8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb11Q91UZ8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb11Q91UZ8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb11Q91UZ8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdhb11Q91UZ8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb11Q91UZ8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb11Q91UZ8 Haglr-201ENSMUST00000100000 2085 ntBASIC16.82■□□□□ 0.28
Pcdhb11Q91UZ8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb11Q91UZ8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb11Q91UZ8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb11Q91UZ8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Gm25016-201ENSMUST00000158399 131 ntBASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Gm7977-201ENSMUST00000193787 748 ntBASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Pcdhb11Q91UZ8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb11Q91UZ8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb11Q91UZ8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb11Q91UZ8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb11Q91UZ8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb11Q91UZ8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb11Q91UZ8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb11Q91UZ8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb11Q91UZ8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb11Q91UZ8 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.79■□□□□ 0.28
Pcdhb11Q91UZ8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb11Q91UZ8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb11Q91UZ8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb11Q91UZ8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb11Q91UZ8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb11Q91UZ8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb11Q91UZ8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhb11Q91UZ8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb11Q91UZ8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb11Q91UZ8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Gm6623-201ENSMUST00000173570 544 ntBASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Gm29518-201ENSMUST00000190858 372 ntBASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb11Q91UZ8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb11Q91UZ8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms