Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim60Q8VI40 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trim60Q8VI40 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.99■□□□□ 0.31
Trim60Q8VI40 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.99■□□□□ 0.31
Trim60Q8VI40 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.99■□□□□ 0.31
Trim60Q8VI40 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim60Q8VI40 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim60Q8VI40 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim60Q8VI40 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.99■□□□□ 0.31
Trim60Q8VI40 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim60Q8VI40 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim60Q8VI40 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim60Q8VI40 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim60Q8VI40 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim60Q8VI40 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.98■□□□□ 0.31
Trim60Q8VI40 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim60Q8VI40 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim60Q8VI40 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim60Q8VI40 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Trim60Q8VI40 Gm715-201ENSMUST00000117865 831 ntBASIC16.98■□□□□ 0.31
Trim60Q8VI40 Gm13186-201ENSMUST00000118031 316 ntBASIC16.98■□□□□ 0.31
Trim60Q8VI40 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.98■□□□□ 0.31
Trim60Q8VI40 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim60Q8VI40 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Trim60Q8VI40 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim60Q8VI40 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trim60Q8VI40 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Trim60Q8VI40 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim60Q8VI40 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim60Q8VI40 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim60Q8VI40 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim60Q8VI40 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim60Q8VI40 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim60Q8VI40 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim60Q8VI40 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim60Q8VI40 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.97■□□□□ 0.31
Trim60Q8VI40 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.97■□□□□ 0.31
Trim60Q8VI40 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim60Q8VI40 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim60Q8VI40 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim60Q8VI40 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim60Q8VI40 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trim60Q8VI40 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim60Q8VI40 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim60Q8VI40 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim60Q8VI40 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim60Q8VI40 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim60Q8VI40 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.96■□□□□ 0.31
Trim60Q8VI40 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.96■□□□□ 0.31
Trim60Q8VI40 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.96■□□□□ 0.31
Trim60Q8VI40 Gm18115-201ENSMUST00000221209 621 ntBASIC16.96■□□□□ 0.31
Trim60Q8VI40 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim60Q8VI40 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trim60Q8VI40 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim60Q8VI40 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim60Q8VI40 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim60Q8VI40 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim60Q8VI40 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim60Q8VI40 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trim60Q8VI40 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim60Q8VI40 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Trim60Q8VI40 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms