Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm1Q8VC85 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm1Q8VC85 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm1Q8VC85 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Lsm1Q8VC85 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm1Q8VC85 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm1Q8VC85 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Lsm1Q8VC85 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Lsm1Q8VC85 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.74■□□□□ 0.11
Lsm1Q8VC85 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm1Q8VC85 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Lsm1Q8VC85 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.74■□□□□ 0.11
Lsm1Q8VC85 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm1Q8VC85 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm1Q8VC85 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm1Q8VC85 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm1Q8VC85 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Gm5417-201ENSMUST00000079706 384 ntBASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.73■□□□□ 0.11
Lsm1Q8VC85 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.72■□□□□ 0.11
Lsm1Q8VC85 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.72■□□□□ 0.11
Lsm1Q8VC85 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Lsm1Q8VC85 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm1Q8VC85 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm1Q8VC85 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Lsm1Q8VC85 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm1Q8VC85 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm1Q8VC85 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm1Q8VC85 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm1Q8VC85 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm1Q8VC85 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm1Q8VC85 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm1Q8VC85 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm1Q8VC85 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm1Q8VC85 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm1Q8VC85 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm1Q8VC85 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm1Q8VC85 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.71■□□□□ 0.11
Lsm1Q8VC85 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm1Q8VC85 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm1Q8VC85 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Lsm1Q8VC85 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Lsm1Q8VC85 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm1Q8VC85 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm1Q8VC85 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm1Q8VC85 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm1Q8VC85 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Lsm1Q8VC85 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm1Q8VC85 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.71■□□□□ 0.11
Lsm1Q8VC85 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.71■□□□□ 0.11
Lsm1Q8VC85 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm1Q8VC85 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.71■□□□□ 0.11
Lsm1Q8VC85 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm1Q8VC85 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.71■□□□□ 0.11
Lsm1Q8VC85 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm1Q8VC85 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm1Q8VC85 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lsm1Q8VC85 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Lsm1Q8VC85 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Lsm1Q8VC85 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.1
Lsm1Q8VC85 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm1Q8VC85 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms