Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc9Q8VC31 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc9Q8VC31 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.83■□□□□ 0.77
Ccdc9Q8VC31 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc9Q8VC31 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc9Q8VC31 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc9Q8VC31 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc9Q8VC31 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Ccdc9Q8VC31 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.76
Ccdc9Q8VC31 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc9Q8VC31 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc9Q8VC31 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc9Q8VC31 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc9Q8VC31 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc9Q8VC31 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc9Q8VC31 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Gm10493-201ENSMUST00000097270 612 ntBASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc9Q8VC31 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc9Q8VC31 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc9Q8VC31 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc9Q8VC31 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc9Q8VC31 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc9Q8VC31 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.8■□□□□ 0.76
Ccdc9Q8VC31 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc9Q8VC31 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Ccdc9Q8VC31 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc9Q8VC31 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc9Q8VC31 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc9Q8VC31 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc9Q8VC31 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc9Q8VC31 AC174678.1-201ENSMUST00000228007 2749 ntBASIC19.8■□□□□ 0.76
Ccdc9Q8VC31 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc9Q8VC31 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc9Q8VC31 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.79■□□□□ 0.76
Ccdc9Q8VC31 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc9Q8VC31 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc9Q8VC31 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.78■□□□□ 0.76
Ccdc9Q8VC31 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc9Q8VC31 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms