Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rpp40Q8R1F9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Gm13312-201ENSMUST00000119631 718 ntBASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
Rpp40Q8R1F9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp40Q8R1F9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp40Q8R1F9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp40Q8R1F9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.53■□□□□ 0.4
Rpp40Q8R1F9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp40Q8R1F9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp40Q8R1F9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp40Q8R1F9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp40Q8R1F9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp40Q8R1F9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.53■□□□□ 0.4
Rpp40Q8R1F9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp40Q8R1F9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp40Q8R1F9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp40Q8R1F9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.53■□□□□ 0.4
Rpp40Q8R1F9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.53■□□□□ 0.4
Rpp40Q8R1F9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp40Q8R1F9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp40Q8R1F9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp40Q8R1F9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp40Q8R1F9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp40Q8R1F9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp40Q8R1F9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp40Q8R1F9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp40Q8R1F9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp40Q8R1F9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.52■□□□□ 0.4
Rpp40Q8R1F9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Rpp40Q8R1F9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp40Q8R1F9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.52■□□□□ 0.4
Rpp40Q8R1F9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp40Q8R1F9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Rpp40Q8R1F9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp40Q8R1F9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rpp40Q8R1F9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp40Q8R1F9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp40Q8R1F9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpp40Q8R1F9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpp40Q8R1F9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpp40Q8R1F9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms