Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cchcr1Q8K2I2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cchcr1Q8K2I2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cchcr1Q8K2I2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.42■□□□□ 0.7
Cchcr1Q8K2I2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.42■□□□□ 0.7
Cchcr1Q8K2I2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cchcr1Q8K2I2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.42■□□□□ 0.7
Cchcr1Q8K2I2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.42■□□□□ 0.7
Cchcr1Q8K2I2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cchcr1Q8K2I2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cchcr1Q8K2I2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cchcr1Q8K2I2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cchcr1Q8K2I2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cchcr1Q8K2I2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cchcr1Q8K2I2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cchcr1Q8K2I2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cchcr1Q8K2I2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cchcr1Q8K2I2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cchcr1Q8K2I2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cchcr1Q8K2I2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cchcr1Q8K2I2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cchcr1Q8K2I2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cchcr1Q8K2I2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cchcr1Q8K2I2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cchcr1Q8K2I2 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.4■□□□□ 0.7
Cchcr1Q8K2I2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cchcr1Q8K2I2 Gm7213-201ENSMUST00000215977 950 ntBASIC19.4■□□□□ 0.7
Cchcr1Q8K2I2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cchcr1Q8K2I2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cchcr1Q8K2I2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cchcr1Q8K2I2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cchcr1Q8K2I2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.4■□□□□ 0.7
Cchcr1Q8K2I2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cchcr1Q8K2I2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cchcr1Q8K2I2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cchcr1Q8K2I2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cchcr1Q8K2I2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cchcr1Q8K2I2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cchcr1Q8K2I2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cchcr1Q8K2I2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cchcr1Q8K2I2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cchcr1Q8K2I2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.38■□□□□ 0.69
Cchcr1Q8K2I2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cchcr1Q8K2I2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cchcr1Q8K2I2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cchcr1Q8K2I2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.38■□□□□ 0.69
Cchcr1Q8K2I2 Gm13436-201ENSMUST00000120418 567 ntBASIC19.38■□□□□ 0.69
Cchcr1Q8K2I2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.38■□□□□ 0.69
Cchcr1Q8K2I2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cchcr1Q8K2I2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cchcr1Q8K2I2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cchcr1Q8K2I2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.38■□□□□ 0.69
Cchcr1Q8K2I2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.38■□□□□ 0.69
Cchcr1Q8K2I2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cchcr1Q8K2I2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cchcr1Q8K2I2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cchcr1Q8K2I2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cchcr1Q8K2I2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cchcr1Q8K2I2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms