Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgcll1Q8JZS7 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.87■□□□□ 0.29
Hmgcll1Q8JZS7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Hmgcll1Q8JZS7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgcll1Q8JZS7 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Hmgcll1Q8JZS7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgcll1Q8JZS7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Hmgcll1Q8JZS7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Hmgcll1Q8JZS7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgcll1Q8JZS7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgcll1Q8JZS7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Hmgcll1Q8JZS7 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.87■□□□□ 0.29
Hmgcll1Q8JZS7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Hmgcll1Q8JZS7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Hmgcll1Q8JZS7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgcll1Q8JZS7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgcll1Q8JZS7 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgcll1Q8JZS7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Gm12644-201ENSMUST00000119935 606 ntBASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgcll1Q8JZS7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmgcll1Q8JZS7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgcll1Q8JZS7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgcll1Q8JZS7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Hmgcll1Q8JZS7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgcll1Q8JZS7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.84■□□□□ 0.29
Hmgcll1Q8JZS7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgcll1Q8JZS7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgcll1Q8JZS7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.84■□□□□ 0.29
Hmgcll1Q8JZS7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgcll1Q8JZS7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgcll1Q8JZS7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgcll1Q8JZS7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgcll1Q8JZS7 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.84■□□□□ 0.29
Hmgcll1Q8JZS7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgcll1Q8JZS7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgcll1Q8JZS7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgcll1Q8JZS7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hmgcll1Q8JZS7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Gm13216-201ENSMUST00000117145 591 ntBASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Gm7461-201ENSMUST00000058918 827 ntBASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Hmgcll1Q8JZS7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms