Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Gm44357-201ENSMUST00000195897 142 ntBASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Gm19658-201ENSMUST00000196231 138 ntBASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Gm44367-201ENSMUST00000196836 138 ntBASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Gm44350-201ENSMUST00000197197 138 ntBASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Gm44390-201ENSMUST00000197533 144 ntBASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Gm44313-201ENSMUST00000198018 138 ntBASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Gm44486-201ENSMUST00000198508 138 ntBASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Gm44314-201ENSMUST00000199263 138 ntBASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Gm44394-201ENSMUST00000199558 138 ntBASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Gm44484-201ENSMUST00000199873 138 ntBASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Gm44466-201ENSMUST00000200264 138 ntBASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Gm44359-201ENSMUST00000200671 138 ntBASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Mzt1-203ENSMUST00000227948 952 ntBASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1aQ8CIG0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Gm11452-201ENSMUST00000122376 690 ntBASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Depdc1aQ8CIG0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1aQ8CIG0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Depdc1aQ8CIG0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.4■□□□□ 0.54
Depdc1aQ8CIG0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Depdc1aQ8CIG0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Depdc1aQ8CIG0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Depdc1aQ8CIG0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.4■□□□□ 0.54
Depdc1aQ8CIG0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.4■□□□□ 0.54
Depdc1aQ8CIG0 Gm6296-201ENSMUST00000222599 943 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms