Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clip4Q8CI96 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clip4Q8CI96 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clip4Q8CI96 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Clip4Q8CI96 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clip4Q8CI96 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clip4Q8CI96 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clip4Q8CI96 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Clip4Q8CI96 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clip4Q8CI96 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.56■□□□□ 0.24
Clip4Q8CI96 Gm7370-201ENSMUST00000219471 767 ntBASIC16.56■□□□□ 0.24
Clip4Q8CI96 Gm18032-201ENSMUST00000222541 538 ntBASIC16.56■□□□□ 0.24
Clip4Q8CI96 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clip4Q8CI96 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clip4Q8CI96 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.56■□□□□ 0.24
Clip4Q8CI96 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clip4Q8CI96 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Clip4Q8CI96 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clip4Q8CI96 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clip4Q8CI96 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.55■□□□□ 0.24
Clip4Q8CI96 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clip4Q8CI96 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.54■□□□□ 0.24
Clip4Q8CI96 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clip4Q8CI96 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clip4Q8CI96 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clip4Q8CI96 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clip4Q8CI96 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Clip4Q8CI96 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.53■□□□□ 0.24
Clip4Q8CI96 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clip4Q8CI96 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Clip4Q8CI96 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.53■□□□□ 0.24
Clip4Q8CI96 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Clip4Q8CI96 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clip4Q8CI96 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clip4Q8CI96 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.53■□□□□ 0.24
Clip4Q8CI96 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.53■□□□□ 0.24
Clip4Q8CI96 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.53■□□□□ 0.24
Clip4Q8CI96 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clip4Q8CI96 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clip4Q8CI96 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clip4Q8CI96 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clip4Q8CI96 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clip4Q8CI96 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clip4Q8CI96 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms