Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 Gm5177-201ENSMUST00000183092 997 ntBASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 Gm45612-201ENSMUST00000211320 160 ntBASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 Gm15427-201ENSMUST00000117288 531 ntBASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 Gm9682-201ENSMUST00000197505 556 ntBASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 Gm18622-201ENSMUST00000219361 595 ntBASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rp1l1Q8CGM2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rp1l1Q8CGM2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rp1l1Q8CGM2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rp1l1Q8CGM2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rp1l1Q8CGM2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rp1l1Q8CGM2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rp1l1Q8CGM2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rp1l1Q8CGM2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rp1l1Q8CGM2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rp1l1Q8CGM2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rp1l1Q8CGM2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rp1l1Q8CGM2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rp1l1Q8CGM2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rp1l1Q8CGM2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Gm11745-201ENSMUST00000121669 448 ntBASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Gm45747-201ENSMUST00000212203 999 ntBASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Mir1895-201ENSMUST00000122615 79 ntBASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.95■□□□□ 0.3
Rp1l1Q8CGM2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rp1l1Q8CGM2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rp1l1Q8CGM2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rp1l1Q8CGM2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Rp1l1Q8CGM2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rp1l1Q8CGM2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rp1l1Q8CGM2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rp1l1Q8CGM2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.94■□□□□ 0.3
Rp1l1Q8CGM2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rp1l1Q8CGM2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rp1l1Q8CGM2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.94■□□□□ 0.3
Rp1l1Q8CGM2 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.94■□□□□ 0.3
Rp1l1Q8CGM2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
Rp1l1Q8CGM2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rp1l1Q8CGM2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rp1l1Q8CGM2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Gm8344-201ENSMUST00000119813 856 ntBASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.93■□□□□ 0.3
Rp1l1Q8CGM2 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms